Browse of TCMCG056C21514 protein

CDS

Accession Number	TCMCG056C21514
gbkey	CDS
Protein Id	XP_031396336.1
Location	join(2284601..2284760,2285219..2285427,2285526..2285666,2285772..2285942,2286824..2286920,2287044..2287165,2287270..2287392,2287472..2287543,2287661..2287753,2287843..2287956,2288050..2288172,2288544..2288729,2288854..2288928,2289081..2289217,2289333..2289467,2289550..2289695,2289771..2289836,2290261..2290367,2290513..2290593,2290678..2290752,2290838..2290939,2291039..2291207,2291296..2291444,2291567..2291650,2291774..2291874,2291991..2292144,2292243..2292317,2292405..2292543,2292620..2293226,2293344..2293404,2293562..2293707,2293855..2294038,2294284..2294382,2294486..2294859,2295111..2295287,2295375..2295471,2295560..2295715,2295871..2296101,2296227..2296310,2296401..2296508)
Gene	LOC116207508
GeneID	116207508
Organism	Punica granatum

Protein

Length	1909aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA580467
db_source	XM_031540476.1
Definition	rRNA biogenesis protein RRP5 isoform X2 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGCTCCGAAATCTCAGAAGAAGAAAGCCAGAGATGGCCCCAAAGTCTCCAAAGCTTCGAAGCAACCATTTAAGCCCAGAAACAAATCCCTGGAAGCCGCCCAGCCGCAAGCTCTCCCCTTTCAGCTCCAAGACGACATGCCAGATTTCCCCCGAGGGGGAGGAAGTTTTCTCAGTAGGAAAGAGAGAGAAGAAGTTCATGCGGAAGTCGACAGGGAGCTTGAAGCTGAGGAGAACGCTTCCAAGTCAAACAAAAAGAAGAATATGCGGAAGAAGGTTAATGCAACAGAAGATGATCTGGGTTCGCTCTTTGGAGACGGAATTAGTGGAAAGCTCCCTAGATTTGCTAATAGGATCACTTTAAAGAATATTTGTCCAGGTATGAAACTCTGGGGAGTTATATCTGAAGTAAATGAGAAAGATTTAGTTGTCAACCTTCCAGGCGGTTTGCGCGGGTTAGTCCGGGCAGCAGATGCGCTGGATCCTGCTTTAGATGATAATGTTGAGGGGACAGAGAATGTTCTCTCGAGCCTGTTCAGTGTTGGACAGTTGGTTTCTTCTGTTGTATCACAAGTGGATGATGACAAGAAAGAGAAAGGGAAACGGAAGATATGGCTCTCTTTGCGTCTCTCTTCGCTGCACAAAGGCTTTACTCTGGAAGCCATTCAAGAGGGAATGGTCCTCTCTGCATGTGTAAAAAGCATTGAAGATCATGGTTATATTCTCCATTTTGGATCGCCATCTTTTACGGGTTTCTTACCAAAACCCAGCCAAGCGGACCCTGGAGGGTCGGAGTTCAAAAGTGGGAAGCTTCTGCAAGGGGTTGTTAAAAGCATAGACAAAACCCGTAAAGTTGTCTACTTGAATTCGGACCTTGATATGGTGTCGAAAATTGTGACAAAGGATCTCAAGGGCATTTCCATGGATCTCCTTGTCCCAGGGATGATGGTTAATGCTCGTGTTCAATCAACACTTGAGAATGGCATCATGCTGTCTTTCCTTACTTACTTTACTGGAACTGTTGATTTATTCCACTTATTAAATCCCTTACCTACAAAAGACTGGAAGGATGATTACCCCCAAAATAAGAAGGTTAATGCCCGAATATTGTTTATTGACCCATTAAGCAGAGCTGTTGGTTTGACTCTGAATCCACATCTTGTTCATAACAAAGCGCCACCTTTGCATGTTGGGATTGGAGATATTTACGAGAATTCCAAAGTGGTTAGGATTGACAGGGGGCGAGGCCTTCTACTGGAAGTCCCTTCTTCTCCTGTTTCTACTTCTGCTTATGTCAGCGTATTGGACATTGCTGAAGATGAAGCACGGAAGTTGGAAAAGAAGTTCAAGGAAGGAAGTAAAGTTCGTGTCCGCATCCTTGGGTTCAAGCATTTGGAAGGGCTTGCTGTTGGTGTACTCAAGGCCGCTGCATTTGAAGGGTCAGTCTTTACCCATTCTGATGTAAAGCCTGGGATGGTGGTGAGAGCTAAAATCATAGCTGTGGACGACTTTGGTGCCATTGTCCAATTTCCCGGTGGTGTCAAGGCACTTTGCCCTGTAACGCATATGTCTGAATTTGAGATTGCTAAACCTAGGAAAAAATTTCAGGTTGGAGCTGAATTGGTTTTCCGTGTGCTTGGTTGCAAGTCCAAGAGAATAACTGTCACGCACAAGAAAACACTTTTAAAGTCCAAGCTTCCTATACTTAGCTCGTATGCAGATGCTACTGATGGATTATTAACACATGGATGGATTGCAAAGATTGAGAAGCATGGATGCTTCGTCCGGTTCTACAATGGAGTCCAAGGCTTCGCTCCCAGACATGATCTCGGTTTAGAACCTGGGTCCGATCCAACTTCAATGTATCATGTTGGACAAGCTGTCAAATGCAGAGTGACAAGTTCTGTTCCTTCAGCACGTCGGATTAATCTTAGTTTTACAACAAAGCATTCAAGGGTTTCGGAAGAGGAAGAAGTAAAGGTGGGAAGCATTGTTTCGGGAGTTGTCGATGGACTGACACCTCGTGGGGTTATAGTGTATGTTAATGGGAAAGGTTACTCAAAGGGTATAATTCTGGAACAGCACCTGGCAGACCACCATGAGCTTGCTACTTTGCTGAAGTGTGTGTTAAAGCCTGGAGCAGAGTTCGATCAGCTTCTAGTTCTAGATATCGAGGGCCACAATCTAGTACTCTCTGCAAAACATTCCCTGATAAATTCTGCTGAGAAGCTTCCCTCCGAAATTTCTGAAATCCATCCGAACATAGTAGTCCATGGATTCGTCTGTAATTTGATTGAGACGGGCTGTTTTGTTCGATTTCTTGGTCGTCTGACTGGTTTCTCTCCCCGAAAGAAGGCTACTGATGACCTGAGAGCTGATCTTTCTGAAGCCTTTTTCGTGGGACAATCAGTTCGTAGTGAAATACTCGATGTGGACAATGAAACGGGTAGAATAACAGTTTCATTGAAGCAATCGACTTGCTCTTCGACTGATTCGTCCTTAATAGAGGGGTACTTCCAGTCTGAAGAGAAGATTGCTAAATTACAACTTTCTGACTCAAACGGGTCTGAGTTAGAATGGGGGGAAGGATTCAAAATTGGCAGCATTATTGAGGGTCGGATTCAGGAGGCAAAAGACTTCGGAGTTGTAGTGAGTTTTGACAAGTATAATGATGTGTTCGGTTTTATTACTCATTACCAGACAGGTGGAAGTTCCATGGAAGTAGGCTCTACTGTTCGAGCTGTGGTTCTTGATGTTTCTAAGAGAGAGCACCTTGTAGATTTATCTATAAAGCCAGAGCTTGTTAAACAATTCGACAAAGAAAATAGCAGCAGTCAGTCACAGAAGCAGAAGCGGAAAAGAGAAGCCTCCAAGAGCTTAGAAGTGCATCAGACAGTAACTGCAGTGGTGGAGATTGTAAAAGAAAATTACCTGGTTCTTTCAGTTCCGGAGTATAACTCCGCAATTGGATTTGCAATGATATATGATTACAACACCCAGAAGTTTCCCAAGAAACAATTTTCCAGTGGACAGAGTGTCGGAGCCACTGTAATGGCACTTCCTAGTCCTTCCACAACAGGGAGGTTACTATTGGTCCTTAAGTCTGTTACTGAGGCCAGTGAGACTTCTAGTTCGAAAAGGGCAAGAAAGAAGTTAGCTTTTAATGTTGGATCTCTGGTTCAAGCTGAGATTACCGAAATCAAGCCCCTTGAATTGCAAGTGAAATTTGGAGTCAATCTTCGAGGAAGGATTCATATAACAGAGATAACTGACGGAAGCACTATGGATAATCCTTTCGGTGACTTCAAAGTTGGCCAGACATTGACGGCGAGGATAATTGCAAAAACAGACAAGAAGAGAACCAGCCAATGGGAGCTGTCTATTAAACAAAAAATGCTGACAGAGTCTTCTTGGAGCGAGGAGAAGCTCAATGAGGAAGACTTTAGCTATTCTTCTGGGCAACCTGTCTCCGGTTATGTGTATAAAGTAGACAGAGATTGGATATGGATGACAATATCTCGACAAGTGAATGCGCAGCTGTTTATTCTCGACAGTTCATGCGAACCAAATGAGCTCCAAGAATTCCAGAGGCGTTTTCCTATTGGAAAAGCTGTCTCAGGCTATGTCCTAAGTGCTAACAGAGAGAAAAAATTGGTGCGCTTGGTCCCACGTTCGTTTCCTGTCCCTAGTGGTGAGACTTCAAATGCAGATGTTACACTTCACATGTGCGAAGGAGATGTGGTGGGCGGAAGAATCTCAAAGATCCTTCCTGGTGTTAGGGGAGTGGTCGTGCAATTGGGCCCAACTGTTTCTGGGCGGGTCCACTTCTCAGAACTCACAGATTCCTTTGTGACTGATCCATTGTCGGGTTATCATGAAGGGCAGTTTGTGAAATGCAAGGTCATTGAGACTGGTCATTCAGCTACGGGGACTTTGCACATCGACCTGTCGTTTCGTTCTTCACTGAAGGGAATGGGAGGTCTTAGTTCGAAGGAGCTTTCAGACAATGTGGACAGTAGCTATAAACGAGTGGAGAAGATAGAGGATCTTCATCCTAATATGATGGTACAGGGTTATGTTAAGAATGTTTCCCCCAAGGGATGTTTCATCTTGCTCTCTCGGAAGTTCGATGCTAAGATTCTCCTCTCCAATTTAGCCAGTGGTTTTGTTGATGATCCCGATAAAGAATTCCCTGTTGGAAAACTCGTGATGGGCAGGGTCTTGTCTGTGGAGCCTGTATCTTGTCGAGTCGAAGTTACTCTGAAGACAAATGATGCAGACAGTGAACCAAAACCGAAGAGTTACGACTTCTCCAGCCTACATATCGGGGCAATTGTCTCAGGCAGGATCAAGCGGATGGAGGCTTACGGTCTATTCATCACAATAGACCATACGAACCTGGTTGGGCTATGCCATATTTCTGAGCTATCCGATGACCATGTTGATAATATTGAGTCCAAGTATAAAGCAGGAGAGAAGGTCACAGCAAAGATATTGAAGGTCGATGAGGAAAGACGCCGGATTTCTCTTGGGATGAAGAATTCTTATTTTCAGGATGTTACAGACATTCAGATGTCATCAGATGAAGAATCCGACGGAGTGACTAAAGAAAATAGCTCCGACGATGAAATAAACTCTACAGTGTTTCGTATTTGCAGTTCGCAGGTCATTGAAGAGGAAAATGGGGGTTCTGCAGCTCTTGCTCAGGTGGAGTCTAGGGCTTCCGTTCCTCCTCTTGAGGTCCCTCTTGAGGAGATCGAGAACCCTGATGAGGATAATCACATGAAACCAAACGAAGATCGTAGCGATGAGGTTAACAATCAAGATGATGATAAGAGCAAGAAACGGGCAAAGAAGAAGGCAAAGGAAGAGAGGGAACGACAAATTAGGGCAGCTGAGGAGAGGCTTCTCGAGAAGGATATTCCCAGGACTGCTGACGAATTTGAGAAACTTGTCAGAAGCTCCCCAAACAGCAGTTTTGTTTGGATAAAGTACATGGCATTCATGCTCTCCTTGGCTGATGTCGAGAAAGCCCGCGAGATTGCTGAAAGGGCTTTGAGGACAATAAACATTAGAGAAGAGAGTGAGAAACTCAATGTCTGGGTCGCATACTTCAACTTGGAGAGCGAGTACGGGAATCCTCGCGAGGAGGCTGTTCAGAATGTATTCCAAAGATCCTTGCAGTACTGTGACCCGAAAAAGGTCCACCTTGCACTTCTGGGGATGTATGAACGGACAGAGCAATATAATTTGGCTGATGATCTCCTTGGCAAAATGGTGAAAAAGTTCAAGCATTCGTGCAAGGTGTGGTTGAGGCGGGTGCATATCACATTGAAGCAGGAAAAGGAAGACGTTAAGCCGGTAATAACCAGGGCTCTGATATGCCTCCCCCACCACAAGCACATCAAATTCATCACACAAACCGCGATTCTCGAGTTCAAGTGTGGGGTCCCTGATAGAGGACGATCATTGTTTGAAAAGATATTGCGGGAGTACCCGAAGCGGACGGATCTATGGAGTGTGTATATTGATCAAGAGATCCGGCTCGGAGATACAGACGTGATTCGGGCACTCTTTGAGAGGGCAACAAGCTTGAGCCTGCCACTTAAGAAGATTAAGTTCCTGTTCAAGAAGTATCTCATGTTTGAGAAGAACACAGGCGACGAAGAACGGGTAGAATACGTGAAGAGGAAGGCAATGGAATACGCTGAGAACACGCAAGATTGA

Protein:   MAAPKSQKKKARDGPKVSKASKQPFKPRNKSLEAAQPQALPFQLQDDMPDFPRGGGSFLSRKEREEVHAEVDRELEAEENASKSNKKKNMRKKVNATEDDLGSLFGDGISGKLPRFANRITLKNICPGMKLWGVISEVNEKDLVVNLPGGLRGLVRAADALDPALDDNVEGTENVLSSLFSVGQLVSSVVSQVDDDKKEKGKRKIWLSLRLSSLHKGFTLEAIQEGMVLSACVKSIEDHGYILHFGSPSFTGFLPKPSQADPGGSEFKSGKLLQGVVKSIDKTRKVVYLNSDLDMVSKIVTKDLKGISMDLLVPGMMVNARVQSTLENGIMLSFLTYFTGTVDLFHLLNPLPTKDWKDDYPQNKKVNARILFIDPLSRAVGLTLNPHLVHNKAPPLHVGIGDIYENSKVVRIDRGRGLLLEVPSSPVSTSAYVSVLDIAEDEARKLEKKFKEGSKVRVRILGFKHLEGLAVGVLKAAAFEGSVFTHSDVKPGMVVRAKIIAVDDFGAIVQFPGGVKALCPVTHMSEFEIAKPRKKFQVGAELVFRVLGCKSKRITVTHKKTLLKSKLPILSSYADATDGLLTHGWIAKIEKHGCFVRFYNGVQGFAPRHDLGLEPGSDPTSMYHVGQAVKCRVTSSVPSARRINLSFTTKHSRVSEEEEVKVGSIVSGVVDGLTPRGVIVYVNGKGYSKGIILEQHLADHHELATLLKCVLKPGAEFDQLLVLDIEGHNLVLSAKHSLINSAEKLPSEISEIHPNIVVHGFVCNLIETGCFVRFLGRLTGFSPRKKATDDLRADLSEAFFVGQSVRSEILDVDNETGRITVSLKQSTCSSTDSSLIEGYFQSEEKIAKLQLSDSNGSELEWGEGFKIGSIIEGRIQEAKDFGVVVSFDKYNDVFGFITHYQTGGSSMEVGSTVRAVVLDVSKREHLVDLSIKPELVKQFDKENSSSQSQKQKRKREASKSLEVHQTVTAVVEIVKENYLVLSVPEYNSAIGFAMIYDYNTQKFPKKQFSSGQSVGATVMALPSPSTTGRLLLVLKSVTEASETSSSKRARKKLAFNVGSLVQAEITEIKPLELQVKFGVNLRGRIHITEITDGSTMDNPFGDFKVGQTLTARIIAKTDKKRTSQWELSIKQKMLTESSWSEEKLNEEDFSYSSGQPVSGYVYKVDRDWIWMTISRQVNAQLFILDSSCEPNELQEFQRRFPIGKAVSGYVLSANREKKLVRLVPRSFPVPSGETSNADVTLHMCEGDVVGGRISKILPGVRGVVVQLGPTVSGRVHFSELTDSFVTDPLSGYHEGQFVKCKVIETGHSATGTLHIDLSFRSSLKGMGGLSSKELSDNVDSSYKRVEKIEDLHPNMMVQGYVKNVSPKGCFILLSRKFDAKILLSNLASGFVDDPDKEFPVGKLVMGRVLSVEPVSCRVEVTLKTNDADSEPKPKSYDFSSLHIGAIVSGRIKRMEAYGLFITIDHTNLVGLCHISELSDDHVDNIESKYKAGEKVTAKILKVDEERRRISLGMKNSYFQDVTDIQMSSDEESDGVTKENSSDDEINSTVFRICSSQVIEEENGGSAALAQVESRASVPPLEVPLEEIENPDEDNHMKPNEDRSDEVNNQDDDKSKKRAKKKAKEERERQIRAAEERLLEKDIPRTADEFEKLVRSSPNSSFVWIKYMAFMLSLADVEKAREIAERALRTINIREESEKLNVWVAYFNLESEYGNPREEAVQNVFQRSLQYCDPKKVHLALLGMYERTEQYNLADDLLGKMVKKFKHSCKVWLRRVHITLKQEKEDVKPVITRALICLPHHKHIKFITQTAILEFKCGVPDRGRSLFEKILREYPKRTDLWSVYIDQEIRLGDTDVIRALFERATSLSLPLKKIKFLFKKYLMFEKNTGDEERVEYVKRKAMEYAENTQD